@article{witte2019judi,
  title={A Large-Scale Framework for Symbolic Implementations of Seismic Inversion Algorithms in Julia},
  author={Witte, Philipp A and Louboutin, Mathias and Kukreja, Navjot and Luporini, Fabio and Lange, Michael and Gorman, Gerard J and Herrmann, Felix J},
  journal={Geophysics},
  volume={84},
  number={3},
  pages={F57--F71},
  year={2019},
  publisher={Society of Exploration Geophysicists},
  doi={10.1190/geo2018-0174.1}
}

@article{herrmann2019judi,
  title={{JUDI}: An open-source software for seismic modeling and inversion},
  author={Herrmann, Felix J and Witte, Philipp A and Louboutin, Mathias},
  journal={The Leading Edge},
  volume={38},
  number={9},
  pages={660--667},
  year={2019},
  publisher={Society of Exploration Geophysicists}
}

@article{louboutin2019devito,
  title={Devito (v3.1.0): An Embedded Domain-Specific Language for Finite Differences and Geophysical Exploration},
  author={Louboutin, Mathias and Lange, Michael and Luporini, Fabio and Kukreja, Navjot and Witte, Philipp A and Herrmann, Felix J and Velesko, Paulius and Gorman, Gerard J},
  journal={Geoscientific Model Development},
  volume={12},
  number={3},
  pages={1165--1187},
  year={2019},
  publisher={Copernicus Publications},
  doi={10.5194/gmd-12-1165-2019}
}

@article{lewis2020rag,
  title={Retrieval-Augmented Generation for Knowledge-Intensive {NLP} Tasks},
  author={Lewis, Patrick and Perez, Ethan and Piktus, Aleksandra and Petroni, Fabio and Karpukhin, Vladimir and Goyal, Naman and K{\"u}ttler, Heinrich and Lewis, Mike and Yih, Wen-tau and Rockt{\"a}schel, Tim and others},
  journal={Advances in Neural Information Processing Systems},
  volume={33},
  pages={9459--9474},
  year={2020}
}

@inproceedings{yao2023react,
  title={{ReAct}: Synergizing Reasoning and Acting in Language Models},
  author={Yao, Shunyu and Zhao, Jeffrey and Yu, Dian and Du, Nan and Shafran, Izhak and Narasimhan, Karthik and Cao, Yuan},
  booktitle={International Conference on Learning Representations (ICLR)},
  year={2023},
  doi={10.48550/arXiv.2210.03629}
}

@article{yang2024sweagent,
  title={{SWE-agent}: Agent-Computer Interfaces Enable Automated Software Engineering},
  author={Yang, John and Jimenez, Carlos E and Wettig, Alexander and Liber, Kilian and Narasimhan, Karthik and Press, Ofir},
  journal={arXiv preprint arXiv:2405.15793},
  year={2024}
}

@article{luporini2020devito,
  title={Architecture and Performance of {Devito}, A System for Automated Stencil Computation},
  author={Luporini, Fabio and Louboutin, Mathias and Lange, Michael and Kukreja, Navjot and Witte, Philipp A and Herrmann, Felix J and Velesko, Paulius and Gorman, Gerard J},
  journal={ACM Transactions on Mathematical Software (TOMS)},
  volume={46},
  number={1},
  pages={1--28},
  year={2020},
  publisher={ACM},
  doi={10.1145/3374916}
}

@misc{jutulgpt2026,
  title={{JutulGPT}: An {AI} Assistant for {JutulDarcy}},
  author={{SINTEF AgentLab}},
  year={2026},
  url={https://github.com/SINTEF-agentlab/JutulGPT},
  note={GitHub repository, accessed March 24, 2026}
}

@article{li2024digitaltwin,
  title={A Digital Twin for Geological Carbon Storage with Controlled Injectivity},
  author={Gahlot, Abhinav Prakash and Li, Haoyun and Yin, Ziyi and Orozco, Rafael and Herrmann, Felix J.},
  journal={arXiv preprint arXiv:2403.19819},
  year={2024},
  eprint={2403.19819},
  archivePrefix={arXiv},
  primaryClass={physics.geo-ph}
}

@misc{li2025seisflowbench,
  title={SeisFlowBench: A Benchmark for Seismic Wave Propagation and Flow Simulations},
  author={Li, Haoyun and Gahlot, Abhinav Prakash and Herrmann, Felix J.},
  year={2025},
  howpublished={Zenodo},
  url={https://zenodo.org/records/14927938},
  doi={10.5281/zenodo.14927938}
}

@inproceedings{li2025co2eor,
  title={CO2 Enhanced Oil Recovery Through Digital Shadow Modeling},
  author={Li, Haoyun and Gahlot, Abhinav Prakash and Herrmann, Felix J.},
  booktitle={International Meeting for Applied Geoscience and Energy},
  year={2025},
  url={https://slim.gatech.edu/Publications/Public/Conferences/SEG/2025/li2025IMAGEceo}
}

@article{baysal1983reverse,
  title={Reverse time migration},
  author={Baysal, Edip and Kosloff, Dan D and Sherwood, John WC},
  journal={Geophysics},
  volume={48},
  number={11},
  pages={1514--1524},
  year={1983},
  publisher={Society of Exploration Geophysicists},
  doi={10.1190/1.1441434}
}

@article{virieux2009overview,
  title={An Overview of Full-Waveform Inversion in Exploration Geophysics},
  author={Virieux, Jean and Operto, St{\'e}phane},
  journal={Geophysics},
  volume={74},
  number={6},
  pages={WCC1--WCC26},
  year={2009},
  publisher={Society of Exploration Geophysicists},
  doi={10.1190/1.3238367}
}

@article{stodden2014best,
  title={Best Practices for Computational Science: Software Infrastructure and Environments for Reproducible and Extensible Research},
  author={Stodden, Victoria and Miguez, Sheila},
  journal={Journal of Open Research Software},
  volume={2},
  number={1},
  year={2014},
  doi={10.5334/jors.ay}
}

@article{wilson2017good,
  title={Good Enough Practices in Scientific Computing},
  author={Wilson, Greg and Bryan, Jennifer and Cranston, Karen and Kitzes, Justin and Nederbragt, Lex and Teal, Tracy K},
  journal={PLoS Computational Biology},
  volume={13},
  number={6},
  pages={e1005510},
  year={2017},
  publisher={Public Library of Science},
  doi={10.1371/journal.pcbi.1005510}
}
